Nonlabens xylanidelens strain DSM 16809

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Nonlabens

Description

Nonlabens xylanidelens strain DSM 16809 is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism and does not form spores. This strain thrives optimally at a temperature of 16.0°C, indicating its potential preference for cooler environments. As a member of the microbial community, Nonlabens xylanidelens may contribute to the breakdown of xylan, a major component of plant hemicellulose, thereby playing a role in organic matter decomposition and nutrient cycling in its habitat. The aerobic nature of this organism suggests it relies on oxygen for its metabolic processes, which may influence its ecological niche, particularly in oxygen-rich environments. Given its specific thermal preference, Nonlabens xylanidelens could be particularly relevant in cold aquatic systems or regions with cooler climates, where it may interact with other microorganisms in the degradation of plant materials. Understanding the metabolic capabilities of this strain can provide insights into its potential applications in biotechnological processes aimed at lignocellulosic biomass utilization.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusNonlabens
SpeciesNonlabens xylanidelens
Strainstrain DSM 16809

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nonlabens xylanidelens strain DSM 16809


Gene Summary

Adenine Count

1069324 bp

Thymine Count

1070207 bp

Guanine Count

564383 bp

Cytosine Count

571203 bp

Genome Length

3276842 bp

Protein-coding Genes

2980 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
uncharacterized protein duf3667LY01_00021Not Available+19556 - 2074946578.6
apag proteinLY01_00022Not Available+20753 - 2113914477.4
delta-1-pyrroline-5-carboxylate dehydrogenaseLY01_00023Not Available+21282 - 2291059751.9
16s rrna m(7)g-527 methyltransferaseLY01_00024Not Available-22994 - 2363824302.5
aspartate aminotransferaseLY01_00025Not Available+23735 - 2492243239.6
trk system potassium uptake protein trkhLY01_00026Not Available-25001 - 2650655060.2
trk system potassium uptake protein trkaLY01_00027Not Available-26506 - 2785549066.4
demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylaseLY01_00028Not Available+28017 - 2875127199.8
putative protein-translocating porin portLY01_00029Not Available+28753 - 2945426665.4
trmh family rna methyltransferaseLY01_00030Not Available-29441 - 3016926616.4

Displaying genes 21 – 30 of 3018 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites