Akkermansia muciniphila strain GP30

Gram-negativeCocciNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Verrucomicrobiota

Class

Verrucomicrobiia

Order

Verrucomicrobiales

Family

Akkermansiaceae

Genus

Akkermansia

Description

Akkermansia muciniphila strain GP30 is a Gram-negative, anaerobic coccus that typically forms pairs or exists as single cells. This strain is optimized for growth at an optimal temperature of 37.0°C, which corresponds with the conditions found in the gastrointestinal tract of its host. As a host-associated microbe, A. muciniphila strain GP30 likely plays a role in the gut microbiome, potentially influencing host health and contributing to mucin degradation due to its name, "muciniphila," which suggests a capacity for utilizing mucin as a carbon source. The anaerobic nature of this strain indicates its reliance on environments devoid of oxygen, which is characteristic of the intestinal milieu where it is commonly found. The ability to thrive in such conditions may facilitate its interactions with other gut microbes and its contribution to the maintenance of gut homeostasis. Given its specific habitat and growth requirements, A. muciniphila strain GP30 may be involved in the modulation of host metabolic functions and immune responses, highlighting the complexity and interdependence of host-microbe interactions in the gastrointestinal ecosystem. Understanding this strain's role could offer insights into the broader implications of gut microbiota on health and disease.

Taxonomy

KingdomPseudomonadati
PhylumVerrucomicrobiota
ClassVerrucomicrobiia
OrderVerrucomicrobiales
FamilyAkkermansiaceae
GenusAkkermansia
SpeciesAkkermansia muciniphila
Strainstrain GP30

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Akkermansia muciniphila strain GP30
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Akkermansia muciniphila strain GP30


Gene Summary

Adenine Count

664895 bp

Thymine Count

680095 bp

Guanine Count

944698 bp

Cytosine Count

899119 bp

Genome Length

3188864 bp

Protein-coding Genes

2605 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
adenylosuccinate synthaseCXU19_00005Not Available-208 - 147946077.4
nicotinate-nucleotide adenylyltransferaseCXU19_00010Not Available-2075 - 346352408.1
hypothetical proteinCXU19_00015Not Available-3490 - 506458195.0
hypothetical proteinCXU19_00020Not Available-5079 - 771597751.0
aminoacyl-trna hydrolaseCXU19_00025Not Available-7857 - 843220903.7
duf58 domain-containing proteinCXU19_00030Not Available-8550 - 945234313.8
aaa family atpaseCXU19_00035Not Available-9491 - 1049537160.0
acyltransferaseCXU19_00040Not Available+10599 - 1145632063.9
hypothetical proteinCXU19_00045Not Available+11477 - 1201320803.0
theronine dehydrogenaseCXU19_00050Not Available-12077 - 1318339793.1

Displaying genes 1 – 10 of 2661 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites