Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agathobacter ruminis strain JK623
Accession NumberPDYG00000000.1
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit sece | CSX02_11175 | Not Available | + | 2364254 - 2364463 | 7626.43 |
| transcription termination/antitermination factor nusg | CSX02_11180 | Not Available | + | 2364482 - 2365000 | 19371.5 |
| 50s ribosomal protein l11 | CSX02_11185 | Not Available | + | 2365014 - 2365439 | 14796.2 |
| 50s ribosomal protein l1 | CSX02_11190 | Not Available | + | 2365507 - 2366202 | 24818.1 |
| 50s ribosomal protein l10 | CSX02_11195 | Not Available | + | 2366461 - 2367021 | 19638.3 |
| 50s ribosomal protein l7/l12 | CSX02_11200 | Not Available | + | 2367069 - 2367446 | 12956.6 |
| dna-directed rna polymerase subunit beta | CSX02_11205 | Not Available | + | 2367725 - 2371804 | 152940.0 |
| dna-directed rna polymerase subunit beta' | CSX02_11210 | Not Available | + | 2371823 - 2375749 | 146063.0 |
| 30s ribosomal protein s12 | CSX02_11215 | Not Available | + | 2375888 - 2376307 | 15185.5 |
| 30s ribosomal protein s7 | CSX02_11220 | Not Available | + | 2376436 - 2376930 | 18448.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
