Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| precorrin-4 c(11)-methyltransferase | CSX02_07135 | Not Available | - | 1492980 - 1493738 | 27560.5 |
| cobalamin biosynthesis protein cbid | CSX02_07140 | Not Available | - | 1493755 - 1494867 | 40504.6 |
| threonine-phosphate decarboxylase | CSX02_07145 | Not Available | - | 1494864 - 1496594 | 63972.4 |
| cobalamin biosynthesis protein cobd | CSX02_07150 | Not Available | - | 1496605 - 1497558 | 35543.8 |
| histidine phosphatase family protein | CSX02_07155 | Not Available | - | 1497515 - 1498138 | 23146.4 |
| hypothetical protein | CSX02_07160 | Not Available | - | 1498111 - 1498524 | 15977.3 |
| adenosylcobinamide-gdp ribazoletransferase | CSX02_07165 | Not Available | - | 1498546 - 1499370 | 30301.9 |
| cobinamide kinase | CSX02_07170 | Not Available | - | 1499319 - 1499855 | 19663.9 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | CSX02_07175 | Not Available | - | 1499852 - 1500928 | 38176.4 |
| cobyric acid synthase cobq | CSX02_07180 | Not Available | - | 1500918 - 1502408 | 55038.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

