Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Aggregatibacter

Description

Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906 is a Gram-negative, rod-shaped bacterium that exhibits facultative anaerobic growth, enabling it to thrive in various oxygen environments. This strain is host-associated, indicating its presence in specific biological systems, which may involve interactions with host organisms. The facultative anaerobic nature of Aggregatibacter aphrophilus allows it to adapt to fluctuating oxygen levels, contributing to its survival in diverse habitats, particularly those associated with animal hosts. This adaptability is significant, as it enables the organism to exploit niches where oxygen availability may vary, potentially influencing its metabolic pathways and ecological interactions. Understanding the ecological role of Aggregatibacter aphrophilus, particularly in relation to its host-associated habitat, may provide insights into its contributions to microbial communities, host health, and the dynamics of microbial interactions. Future studies could elucidate the specific mechanisms by which this bacterium interacts with its host, further highlighting its biological significance within host-associated ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusAggregatibacter
SpeciesAggregatibacter aphrophilus
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906

Accession NumberNZ_LR134327.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
methionine abc transporter permeaseEL144_RS06040Not Available+1227462 - 122813924665.1
metq/nlpa family lipoproteinEL144_RS06045Not Available+1228181 - 122902330332.1
ybhb/ybcl family raf kinase inhibitor-like proteinEL144_RS06050Not Available+1229130 - 122962718366.4
trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trmlEL144_RS06055Not Available+1229741 - 123021718073.8
virk/ybjx family proteinEL144_RS06060Not Available-1230294 - 123116934276.9
ribosome biogenesis gtp-binding protein yiha/ysxcEL144_RS06065Not Available+1231318 - 123193222823.6
type vi secretion system atpase tsshEL144_RS06070Not Available+1232250 - 123483895276.9
paar domain-containing proteinEL144_RS06075Not Available+1235193 - 12354599063.97
type vi secretion system vgr family proteinEL144_RS06080Not Available+1235531 - 123758878060.1
duf4123 domain-containing proteinEL144_RS06085Not Available+1237758 - 123909552651.1

Displaying genes 1211 – 1220 of 2245 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites