Chromobacterium violaceum strain NCTC9695

Gram-negativeCocciMotileFacultatively anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Chromobacteriaceae

Genus

Chromobacterium

Description

Chromobacterium violaceum strain NCTC9695 is a facultatively anaerobic, Gram-negative coccus that thrives optimally at a temperature of 25.0°C. This strain, like other members of the Chromobacterium genus, is notable for its versatility in habitat, being capable of surviving in multiple environments. The coccus shape of this bacterium contributes to its unique physiological characteristics, which may influence its interaction with various ecosystems. The facultatively anaerobic nature of C. violaceum strain NCTC9695 indicates its ability to adapt to both aerobic and anaerobic conditions, allowing it to colonize diverse niches where oxygen levels may fluctuate. Such adaptability may confer advantages in environments rich in organic matter, where oxygen consumption can create anaerobic zones. Furthermore, the optimal growth temperature of 25.0°C suggests a preference for mesophilic conditions, aligning with many environmental habitats, such as soil and water, where temperatures typically fluctuate around this range. The ecological implications of this strain’s versatility and adaptability could be significant, particularly in biogeochemical cycling and potential bioremediation processes, as its metabolic capabilities may allow it to utilize various substrates in diverse habitats. Understanding the ecological role of C. violaceum strain NCTC9695 could provide insights into its potential applications in environmental microbiology and biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyChromobacteriaceae
GenusChromobacterium
SpeciesChromobacterium violaceum
Strainstrain NCTC9695

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Chromobacterium violaceum strain NCTC9695
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultatively anaerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chromobacterium violaceum strain NCTC9695


Gene Summary

Adenine Count

827974 bp

Thymine Count

833142 bp

Guanine Count

1538590 bp

Cytosine Count

1533847 bp

Genome Length

4733553 bp

Protein-coding Genes

4729 genes

Non-Coding Genes

242 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative phage tail proteinEL155_RS01765Not Available-341056 - 34241147491.5
Tail fiber assembly-like proteinEL155_RS01770Not Available-342594 - 34316921048.7
hypothetical proteinEL155_RS01775Not Available-343173 - 3434909326.59
Structural proteinEL155_RS01780Not Available-343454 - 34427828067.8
Defective tail fiber proteinEL155_RS01785Not Available-344275 - 34459811644.7
Tail fiber assembly-like proteinEL155_RS01790Not Available-344780 - 34530719232.7
Phage tail collar proteinEL155_RS01795Not Available-345565 - 34615221360.7
Defective tail fiber proteinEL155_RS01800Not Available-346812 - 34709610116.8
Tail proteinEL155_RS01805Not Available-347204 - 34778221239.3
Baseplate j proteinEL155_RS01810Not Available-347779 - 34886939391.9

Displaying genes 1 – 10 of 4971 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

108 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–10 of 108 metabolites