Raoultella terrigena strain NCTC13098

Rodfacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Raoultella terrigena strain NCTC13098 is a Gram-negative, rod-shaped bacterium that is categorized as a facultative anaerobe. This microbe is notably versatile in its ecological niches, having been identified in freshwater, milk, plants, and soil environments. The ability to thrive in both aerobic and anaerobic conditions suggests that R. terrigena has adapted to various habitats, enabling it to exploit diverse carbon sources available in its surroundings. The presence of R. terrigena in freshwater ecosystems highlights its potential role in nutrient cycling, particularly in the degradation of organic matter. Moreover, its occurrence in milk and on plant surfaces indicates that it may interact with other microorganisms and contribute to the microbial community dynamics in these environments. These traits suggest that R. terrigena could play a role in the maintenance of microbial diversity and the promotion of ecosystem resilience, underscoring the importance of understanding its ecological functions in the habitats it occupies. Further research into its metabolic capabilities and interactions within these habitats could provide insights into its ecological significance and potential applications in bioremediation or agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella terrigena
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatFresh water; milk; plants; soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Raoultella terrigena strain NCTC13098


Gene Summary

Adenine Count

1303232 bp

Thymine Count

1302256 bp

Guanine Count

1736546 bp

Cytosine Count

1731917 bp

Genome Length

6073951 bp

Protein-coding Genes

5593 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
duf262 domain-containing proteinELY08_RS09150Not Available-1863060 - 186399536300.0
Portal proteinELY08_RS09155Not Available-1864365 - 186542039938.5
TerminaseELY08_RS09160Not Available-1865420 - 186718766909.6
Capsid scaffolding proteinELY08_RS09165Not Available+1867354 - 186820930679.5
Major capsid proteinELY08_RS09170Not Available+1868283 - 186914632393.7
Major capsid proteinELY08_RS29805Not Available+1869140 - 18692956205.36
TerminaseELY08_RS09175Not Available+1869368 - 187008825777.2
Head completion-stabilization proteinELY08_RS09180Not Available+1870185 - 187069318333.1
phage tail proteinELY08_RS09185Not Available+1870693 - 18708976982.36
HolinELY08_RS09190Not Available+1870902 - 187119010673.5

Displaying genes 11 – 20 of 5846 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003491(2S)-2-acetolactateC5H7O4Chemical structure of (2S)-2-acetolactateNot available
Average131.108Da
Monoisotopic131.0349823Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da

Displaying 1–5 of 5 metabolites