Nocardia farcinica strain NCTC11134

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Nocardia

Description

Nocardia farcinica strain NCTC11134 is a Gram-positive, coccoid bacterium that forms filamentous structures and is classified as a chemoheterotroph. This strain thrives in aerobic environments and is typically found in soil habitats, where it likely plays a role in the degradation of organic matter. Optimal growth occurs at a temperature of 37.0°C, which is consistent with its adaptation to terrestrial ecosystems where temperature can vary but often reaches this range. As a nonsporulating organism, N. farcinica strain NCTC11134 relies on its filamentous growth form to enhance nutrient absorption and survival in competitive soil environments. The filamentous arrangement may provide advantages in colonization and resource utilization, allowing the organism to efficiently exploit its ecological niche. This unique morphology, combined with its metabolic capabilities, suggests that N. farcinica may play an important role in nutrient cycling within its habitat, contributing to soil health and biodiversity. Overall, the traits exhibited by Nocardia farcinica strain NCTC11134 illustrate its adaptation to soil environments and its potential ecological significance as a microbial decomposer, highlighting the intricate interactions that occur within terrestrial ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusNocardia
SpeciesNocardia farcinica
Strainstrain NCTC11134

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Nocardia farcinica strain NCTC11134
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Nocardia farcinica strain NCTC11134


Gene Summary

Adenine Count

2410 bp

Thymine Count

2711 bp

Guanine Count

5165 bp

Cytosine Count

4804 bp

Genome Length

15090 bp

Protein-coding Genes

24 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
recombination protein rectAMO33_RS29270P33228-700 - 162634461.9
yqaj viral recombinase family proteinAMO33_RS29275Not Available-1626 - 261536926.9
hypothetical proteinAMO33_RS31935Not Available-2612 - 27765956.35
hypothetical proteinAMO33_RS29280Not Available+3153 - 354514690.3
hypothetical proteinAMO33_RS29285Not Available-3608 - 394011958.4
helix-turn-helix transcriptional regulatorAMO33_RS29290Not Available+4456 - 47018994.65
hypothetical proteinAMO33_RS29295Not Available+4784 - 542822739.0
tyrosine-type recombinase/integraseAMO33_RS29300Not Available-5690 - 700648131.9
alpa family transcriptional regulatorAMO33_RS29305Not Available-7032 - 72267585.12
helix-turn-helix transcriptional regulatorAMO33_RS29310Not Available-7360 - 820531652.3

Displaying genes 1 – 10 of 24 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

35 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000976enol-oxaloacetateC4H2O5Chemical structure of enol-oxaloacetateNot available
Average130.056Da
Monoisotopic129.9913203Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002147N-ethylsuccinimideC6H9NO2Chemical structure of N-ethylsuccinimide2314-78-5
Average127.1412Da
Monoisotopic127.0633285Da
BASm0002593(2E)-dodecenoyl-CoAC33H52N7O17P3SChemical structure of (2E)-dodecenoyl-CoA1066-12-2
Average943.789Da
Monoisotopic943.2353235Da
BASm0002655octadecanoyl-CoAC39H66N7O17P3SChemical structure of octadecanoyl-CoANot available
Average1029.97Da
Monoisotopic1029.347070181Da

Displaying 1–10 of 35 metabolites