Formosa agariphila KMM 3901 strain type strain: KMM 3901

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Formosa

Description

Formosa agariphila KMM 3901 is a Gram-negative, rod-shaped bacterium characterized as a non-spore-forming organism that exhibits facultative aerobe/anaerobe metabolic capabilities. This strain thrives optimally at a temperature of 16.0 °C, indicating a preference for moderate thermal conditions. The facultative nature of its oxygen requirement suggests that F. agariphila KMM 3901 can adapt to varying oxygen levels, allowing it to occupy diverse ecological niches, particularly in environments where oxygen availability fluctuates. The unique combination of its Gram-negative classification and rod shape positions F. agariphila KMM 3901 within a specific morphological and physiological framework typical of certain aquatic microorganisms. This adaptability in oxygen utilization and temperature suggests potential roles in biogeochemical cycles, especially in cold marine or brackish environments where organic matter decomposition may occur. The ability of this strain to thrive under both aerobic and anaerobic conditions may contribute to its ecological success in nutrient-rich habitats, enabling it to interact dynamically with other microbial communities. Thus, Formosa agariphila KMM 3901 exemplifies the versatility of certain microorganisms in adapting to fluctuating environmental conditions, which could have implications for understanding microbial dynamics in aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFormosa
SpeciesFormosa agariphila
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Formosa agariphila KMM 3901 strain type strain: KMM 3901

Accession NumberNZ_HG315671.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3545 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
rnd family transporterBN863_RS00980Not Available-244665 - 24707691524.8
hypothetical proteinBN863_RS00985Not Available-247136 - 24838347960.9
ribosome recycling factorBN863_RS00990Not Available-248525 - 24908220712.8
ump kinaseBN863_RS00995Not Available-249124 - 24983125487.0
translation elongation factor tsBN863_RS01000Not Available-250010 - 25097534560.3
30s ribosomal protein s2BN863_RS01005Not Available-251076 - 25184928437.6
30s ribosomal protein s9BN863_RS01010Not Available-252053 - 25243914474.7
50s ribosomal protein l13BN863_RS01015Not Available-252439 - 25289416565.0
duf2853 family proteinBN863_RS01020Not Available+253268 - 25360012058.5
nad(p)-dependent oxidoreductaseBN863_RS01025Not Available-253682 - 25462034421.9

Displaying genes 231 – 240 of 3622 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001415beta-L-rhamnoseC6H12O5Chemical structure of beta-L-rhamnoseNot available
Average164.1565Da
Monoisotopic164.0684735Da
BASm0001463alpha-L-rhamnoseC6H12O5Chemical structure of alpha-L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.068473494Da
BASm00031102-dehydro-3-deoxy-D-galactonateC6H10O6Chemical structure of 2-dehydro-3-deoxy-D-galactonateNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da

Displaying 1–4 of 4 metabolites