Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia violacea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Trinickia violacea strain DHOD12
Accession NumberNZ_CP040077.1
Gene Summary
Adenine Count
871151 bp
Thymine Count
876143 bp
Guanine Count
1513359 bp
Cytosine Count
1515264 bp
Genome Length
4775917 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| b12-binding domain-containing radical sam protein | FAZ95_RS01480 | Not Available | + | 354878 - 356671 | 68623.6 |
| penicillin-binding protein 1a | FAZ95_RS01490 | Not Available | + | 357559 - 359751 | 81094.8 |
| lea type 2 family protein | FAZ95_RS01495 | Not Available | + | 360141 - 360635 | 17496.0 |
| leucine-rich repeat domain-containing protein | FAZ95_RS01500 | Not Available | - | 360692 - 361957 | 46054.6 |
| hypothetical protein | FAZ95_RS01505 | Not Available | - | 362237 - 362779 | 19819.5 |
| hypothetical protein | FAZ95_RS01510 | Not Available | - | 362956 - 363414 | 15235.1 |
| aspartate/glutamate racemase family protein | FAZ95_RS01515 | Not Available | - | 363966 - 364739 | 28039.6 |
| d-amino acid dehydrogenase | FAZ95_RS01520 | Not Available | - | 364736 - 365980 | 45446.4 |
| branched-chain amino acid abc transporter substrate-binding protein | FAZ95_RS01525 | Not Available | + | 366346 - 367548 | 41658.6 |
| branched-chain amino acid abc transporter permease | FAZ95_RS01530 | Not Available | + | 367585 - 368484 | 32004.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.