Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Pseudoduganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Pseudoduganella |
| Species | Pseudoduganella umbonata |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoduganella umbonata strain DSMZ 26121
Accession NumberNZ_CP040017.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6168 genes
Non-Coding Genes
133 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | FCL38_RS01155 | Not Available | - | 267707 - 269581 | 67695.7 |
| fumarylacetoacetase | FCL38_RS01160 | Not Available | - | 269863 - 271173 | 46335.5 |
| homogentisate 1,2-dioxygenase | FCL38_RS01165 | Not Available | - | 271170 - 272462 | 47476.0 |
| deor/glpr family dna-binding transcription regulator | FCL38_RS01170 | Not Available | - | 272574 - 273356 | 27783.5 |
| heme-degrading domain-containing protein | FCL38_RS01175 | Not Available | - | 273353 - 273832 | 17278.3 |
| oxidoreductase | FCL38_RS01180 | Not Available | - | 273843 - 274880 | 36922.9 |
| lysr family transcriptional regulator | FCL38_RS01185 | Not Available | - | 274940 - 275854 | 34606.4 |
| muconate/chloromuconate family cycloisomerase | FCL38_RS01190 | Not Available | + | 275957 - 277066 | 39442.9 |
| muconolactone delta-isomerase | FCL38_RS01195 | Not Available | + | 277089 - 277379 | 10972.3 |
| catechol 1,2-dioxygenase | FCL38_RS01200 | Not Available | + | 277401 - 278321 | 33379.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.