Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Pseudoduganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Pseudoduganella |
| Species | Pseudoduganella umbonata |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoduganella umbonata strain DSMZ 26121
Accession NumberNZ_CP040017.1
Gene Summary
Adenine Count
1289596 bp
Thymine Count
1285817 bp
Guanine Count
2426943 bp
Cytosine Count
2423809 bp
Genome Length
7426165 bp
Protein-coding Genes
6168 genes
Non-Coding Genes
133 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp endopeptidase proteolytic subunit clpp | FCL38_RS06485 | Not Available | - | 1573907 - 1574524 | 22445.1 |
| trigger factor | FCL38_RS06490 | Not Available | - | 1574628 - 1575968 | 49241.4 |
| Trna-leu | Not Available | Not Available | + | 1576001 - 1576087 | Not Available |
| efflux rnd transporter permease subunit | FCL38_RS06500 | Not Available | - | 1576446 - 1579535 | 113057.0 |
| efflux rnd transporter periplasmic adaptor subunit | FCL38_RS06505 | Not Available | - | 1579532 - 1580635 | 38839.8 |
| squalene synthase hpnc | FCL38_RS06510 | Not Available | + | 1580810 - 1581631 | 30770.3 |
| presqualene diphosphate synthase hpnd | FCL38_RS06515 | Not Available | + | 1581666 - 1582499 | 31694.9 |
| hydroxysqualene dehydroxylase hpne | FCL38_RS06520 | Not Available | + | 1582513 - 1583808 | 45333.3 |
| duf1700 domain-containing protein | FCL38_RS06525 | Not Available | + | 1584073 - 1584858 | 28162.0 |
| head gin domain-containing protein | FCL38_RS06530 | Not Available | + | 1584858 - 1585670 | 27807.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.