Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Pseudoduganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Pseudoduganella |
| Species | Pseudoduganella umbonata |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoduganella umbonata strain DSMZ 26121
Accession NumberNZ_CP040017.1
Gene Summary
Adenine Count
1289596 bp
Thymine Count
1285817 bp
Guanine Count
2426943 bp
Cytosine Count
2423809 bp
Genome Length
7426165 bp
Protein-coding Genes
6168 genes
Non-Coding Genes
133 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methylisocitrate lyase | FCL38_RS05855 | Not Available | + | 1424360 - 1425244 | 32226.5 |
| 2-methylcitrate synthase | FCL38_RS05860 | Not Available | + | 1425274 - 1426431 | 42100.2 |
| fe/s-dependent 2-methylisocitrate dehydratase acnd | FCL38_RS05865 | Not Available | + | 1426465 - 1429062 | 93963.6 |
| 2-methylaconitate cis-trans isomerase prpf | FCL38_RS05870 | Not Available | + | 1429166 - 1430356 | 41013.3 |
| ggdef domain-containing protein | FCL38_RS05875 | Not Available | - | 1430436 - 1431833 | 50709.6 |
| had domain-containing protein | FCL38_RS05880 | Not Available | - | 1432592 - 1433116 | 20169.2 |
| had domain-containing protein | FCL38_RS32445 | Not Available | - | 1433998 - 1434510 | 19423.5 |
| hypothetical protein | FCL38_RS05890 | Not Available | - | 1434542 - 1434994 | 17605.1 |
| hypothetical protein | FCL38_RS05895 | Not Available | - | 1435360 - 1435794 | 16760.8 |
| helix-turn-helix domain-containing protein | FCL38_RS05900 | Not Available | + | 1436306 - 1436545 | 8505.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.