Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sos response-associated peptidase | DN752_RS04400 | Not Available | - | 1142860 - 1143537 | 25860.8 |
| hypothetical protein | DN752_RS04405 | Not Available | + | 1143646 - 1144089 | 16976.4 |
| helix-turn-helix transcriptional regulator | DN752_RS04410 | Not Available | + | 1144250 - 1144597 | 13052.8 |
| winged helix-turn-helix transcriptional regulator | DN752_RS04415 | Not Available | - | 1144613 - 1144813 | 7100.5 |
| hypothetical protein | DN752_RS25105 | Not Available | + | 1144920 - 1145051 | 4639.74 |
| thioredoxin family protein | DN752_RS04425 | Not Available | + | 1145608 - 1145835 | 7934.48 |
| plp-dependent aminotransferase family protein | DN752_RS04430 | Not Available | - | 1145960 - 1147384 | 53349.0 |
| cupin domain-containing protein | DN752_RS04435 | Not Available | + | 1147484 - 1147945 | 17563.6 |
| dihydrodipicolinate synthase family protein | DN752_RS04440 | Not Available | + | 1148004 - 1148909 | 32993.2 |
| type 1 glutamine amidotransferase | DN752_RS04445 | Not Available | + | 1148991 - 1149704 | 26897.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.