Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase family protein | DN752_RS04300 | Not Available | + | 1115986 - 1116294 | 11552.8 |
| duf86 domain-containing protein | DN752_RS04305 | Not Available | + | 1116284 - 1116622 | 12861.8 |
| rtec domain-containing protein | DN752_RS04310 | Not Available | - | 1116661 - 1117500 | 32812.5 |
| hypothetical protein | DN752_RS04315 | Not Available | - | 1117490 - 1119043 | 60479.3 |
| doxx family protein | DN752_RS04320 | Not Available | + | 1119351 - 1119806 | 16572.5 |
| duf6520 family protein | DN752_RS04325 | Not Available | + | 1120076 - 1120357 | 10131.8 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS04330 | Not Available | - | 1120404 - 1121768 | 51332.8 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS04335 | Not Available | - | 1122016 - 1125225 | 119116.0 |
| tlpa family protein disulfide reductase | DN752_RS04340 | Not Available | - | 1125222 - 1126586 | 50803.9 |
| hypothetical protein | DN752_RS04345 | Not Available | - | 1127017 - 1127220 | 7730.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.