Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-e domain-containing protein | DN752_RS03545 | Not Available | + | 940305 - 941285 | 38043.4 |
| peptidase | DN752_RS03550 | Not Available | + | 941282 - 942025 | 28190.5 |
| transglutaminase family protein | DN752_RS03555 | Not Available | + | 942015 - 942878 | 32771.7 |
| rna polymerase sigma factor | DN752_RS03560 | Not Available | - | 943154 - 943825 | 26230.8 |
| rna polymerase sigma factor | DN752_RS03565 | Not Available | + | 944143 - 944682 | 20998.1 |
| fecr family protein | DN752_RS03570 | Not Available | + | 944794 - 945774 | 37139.3 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS03575 | Not Available | + | 945892 - 949419 | 131114.0 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS03580 | Not Available | + | 949436 - 951214 | 67626.1 |
| endonuclease/exonuclease/phosphatase family protein | DN752_RS03585 | Not Available | + | 951544 - 952209 | 25426.5 |
| lipocalin family protein | DN752_RS03590 | Not Available | - | 952290 - 952661 | 14283.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.