Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-rhamnosidase | DN752_RS03495 | Not Available | - | 921548 - 924247 | 101534.0 |
| rok family protein | DN752_RS03500 | Not Available | - | 924593 - 925471 | 31739.6 |
| gh92 family glycosyl hydrolase | DN752_RS03505 | Not Available | - | 925478 - 927640 | 81194.3 |
| glycoside hydrolase family 125 protein | DN752_RS03510 | Not Available | - | 927807 - 929225 | 53630.2 |
| glycoside hydrolase family 76 protein | DN752_RS03515 | Not Available | - | 929767 - 930921 | 43246.7 |
| suse domain-containing protein | DN752_RS03520 | Not Available | - | 931283 - 932410 | 42141.5 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS03525 | Not Available | - | 932442 - 934073 | 61671.6 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS03530 | Not Available | - | 934086 - 937457 | 125336.0 |
| fecr family protein | DN752_RS03535 | Not Available | - | 937500 - 938552 | 40533.9 |
| circularly permuted type 2 atp-grasp protein | DN752_RS03540 | Not Available | + | 938870 - 940294 | 53540.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.