Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated endonuclease cas2 | DN752_RS03290 | Not Available | + | 874570 - 874917 | 13647.7 |
| tonb-dependent receptor | DN752_RS25285 | Not Available | - | 876873 - 876989 | 4048.97 |
| hypothetical protein | DN752_RS03300 | Not Available | + | 877330 - 877956 | 22216.7 |
| nad(p)/fad-dependent oxidoreductase | DN752_RS03305 | Not Available | - | 877961 - 879211 | 45829.6 |
| 4-hydroxyproline epimerase | DN752_RS03310 | Not Available | - | 879533 - 880531 | 36920.1 |
| aldehyde dehydrogenase (nadp(+)) | DN752_RS03315 | Not Available | - | 881068 - 882516 | 51308.1 |
| dihydrodipicolinate synthase family protein | DN752_RS03320 | Not Available | - | 882516 - 883427 | 33989.3 |
| hypothetical protein | DN752_RS24345 | Not Available | - | 883916 - 884197 | 10643.7 |
| exodeoxyribonuclease vii large subunit | DN752_RS03325 | Not Available | + | 884862 - 886175 | 49638.7 |
| exodeoxyribonuclease vii small subunit | DN752_RS03330 | Not Available | + | 886168 - 886371 | 7610.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.