Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lytr/algr family response regulator transcription factor | DN752_RS03240 | Not Available | + | 856137 - 856907 | 29346.4 |
| polysaccharide lyase | DN752_RS03245 | Not Available | + | 857854 - 859569 | 63355.4 |
| hypothetical protein | DN752_RS03250 | Not Available | + | 860547 - 861281 | 28476.0 |
| tonb-dependent receptor | DN752_RS03255 | Not Available | + | 861285 - 864050 | 104868.0 |
| duf4249 domain-containing protein | DN752_RS03260 | Not Available | + | 864057 - 865226 | 43704.1 |
| hypothetical protein | DN752_RS03265 | Not Available | + | 865234 - 866877 | 60981.4 |
| gamma-glutamyltransferase | DN752_RS03270 | Not Available | - | 867238 - 868986 | 63474.1 |
| type ii crispr rna-guided endonuclease cas9 | DN752_RS03275 | Not Available | + | 869427 - 870863 | 56458.3 |
| type ii crispr rna-guided endonuclease cas9 | DN752_RS03280 | Not Available | + | 870909 - 873629 | 106448.0 |
| type ii crispr-associated endonuclease cas1 | DN752_RS03285 | Not Available | + | 873684 - 874577 | 33568.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.