Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chitobiase/beta-hexosaminidase c-terminal domain-containing protein | DN752_RS03140 | Not Available | - | 825297 - 827426 | 78290.2 |
| duf1501 domain-containing protein | DN752_RS03145 | Not Available | - | 827530 - 828984 | 53987.4 |
| psd1 and planctomycete cytochrome c domain-containing protein | DN752_RS03150 | Not Available | - | 828986 - 831298 | 87252.3 |
| sdr family oxidoreductase | DN752_RS03155 | Not Available | - | 831884 - 832528 | 22624.1 |
| sdr family nad(p)-dependent oxidoreductase | DN752_RS03160 | Not Available | + | 832924 - 833682 | 26306.7 |
| tetr/acrr family transcriptional regulator | DN752_RS03165 | Not Available | + | 833778 - 834359 | 21992.5 |
| hypothetical protein | DN752_RS03170 | Not Available | + | 834555 - 835097 | 21523.7 |
| duf4979 domain-containing protein | DN752_RS03175 | Not Available | - | 836321 - 838000 | 62748.2 |
| alpha-l-fucosidase | DN752_RS03180 | Not Available | - | 838603 - 840066 | 56364.0 |
| family 20 glycosylhydrolase | DN752_RS03185 | Not Available | - | 840516 - 841634 | 43101.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.