Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor domain-containing protein | DN752_RS24845 | Not Available | - | 794495 - 796195 | 64094.5 |
| carboxypeptidase-like regulatory domain-containing protein | DN752_RS24850 | Not Available | - | 796192 - 797565 | 48855.8 |
| laci family dna-binding transcriptional regulator | DN752_RS03055 | Not Available | - | 798521 - 799555 | 39142.3 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DN752_RS03060 | Not Available | - | 800060 - 801664 | 58065.8 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS03065 | Not Available | - | 801667 - 804786 | 112390.0 |
| hypothetical protein | DN752_RS24340 | Not Available | - | 804900 - 805046 | 5122.01 |
| duf6600 domain-containing protein | DN752_RS03070 | Not Available | + | 805529 - 806812 | 48384.2 |
| histone h1 | DN752_RS03075 | Not Available | + | 807169 - 807348 | 6737.99 |
| duf1080 domain-containing protein | DN752_RS03080 | Not Available | - | 807427 - 808092 | 24143.0 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS03085 | Not Available | - | 808167 - 809927 | 66889.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.