Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DN752_RS02485 | Not Available | - | 659460 - 662447 | 109165.0 |
| tonb-dependent receptor domain-containing protein | DN752_RS02490 | Not Available | - | 662935 - 665448 | 92207.3 |
| sensor histidine kinase | DN752_RS02495 | Not Available | + | 665751 - 666827 | 41443.9 |
| lytr/algr family response regulator transcription factor | DN752_RS02500 | Not Available | + | 666824 - 667555 | 28144.0 |
| nucleoside deaminase | DN752_RS02505 | Not Available | + | 668072 - 668548 | 17418.8 |
| pyridoxal phosphate-dependent decarboxylase family protein | DN752_RS02510 | Not Available | + | 668597 - 669985 | 51291.0 |
| hypothetical protein | DN752_RS02515 | Not Available | - | 670114 - 671670 | 61868.1 |
| 2-isopropylmalate synthase | DN752_RS02520 | Not Available | + | 671814 - 672986 | 42872.5 |
| signal recognition particle protein | DN752_RS02525 | Not Available | - | 673255 - 674592 | 49336.1 |
| hypothetical protein | DN752_RS02530 | Not Available | - | 675195 - 675725 | 20343.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.