Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase complex e1 component subunit beta | DN752_RS02440 | Not Available | + | 637921 - 638901 | 35830.1 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS02445 | Not Available | + | 639605 - 642667 | 111401.0 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS02450 | Not Available | + | 642685 - 644121 | 53397.1 |
| hypothetical protein | DN752_RS24330 | Not Available | - | 644308 - 644589 | 10751.9 |
| acyloxyacyl hydrolase | DN752_RS02455 | Not Available | - | 645195 - 646427 | 46670.7 |
| hybrid sensor histidine kinase/response regulator transcription factor | DN752_RS02460 | Not Available | - | 646825 - 650865 | 152475.0 |
| alpha-l-fucosidase | DN752_RS02465 | Not Available | - | 651168 - 652484 | 50648.1 |
| hypothetical protein | DN752_RS02470 | Not Available | - | 652954 - 654636 | 62809.9 |
| gh92 family glycosyl hydrolase | DN752_RS02475 | Not Available | - | 654674 - 656980 | 87035.0 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS02480 | Not Available | - | 657586 - 659427 | 68280.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.