Echinicola strongylocentroti strain MEBiC08714

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Echinicola

Description

Echinicola strongylocentroti strain MEBiC08714 is a Gram-negative, rod-shaped bacterium that exhibits heterotrophic metabolism and requires aerobic conditions for growth, with an optimal growth temperature of 25.0 °C. This strain is characterized by its capacity to utilize organic compounds as an energy source, which is typical for many members of the Echinicola genus. The Gram-negative cell wall structure of E. strongylocentroti suggests a potential for diverse interactions with its environment, including possible roles in nutrient cycling or symbiotic relationships. Its aerobic nature indicates a preference for oxygen-rich environments, which may limit its habitat to specific ecological niches where oxygen is readily available. The optimal growth temperature of 25.0 °C aligns with the typical thermal range for mesophilic organisms, indicating that this strain might thrive in moderate climates or environments that are not subject to extreme temperature fluctuations. Understanding the metabolic capabilities and growth conditions of Echinicola strongylocentroti strain MEBiC08714 could provide insights into its ecological role, particularly in marine or freshwater ecosystems where such heterotrophic bacteria contribute to the decomposition of organic matter. This could have implications for the broader microbial community dynamics and biogeochemical processes within its native habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusEchinicola
SpeciesEchinicola strongylocentroti
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Echinicola strongylocentroti strain MEBiC08714

Accession NumberNZ_CP030041.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4741 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
gfo/idh/moca family proteinDN752_RS23880Not Available-6125751 - 612710050122.7
duf1080 domain-containing proteinDN752_RS23885Not Available-6127225 - 612861051884.4
uxaa family hydrolaseDN752_RS23890Not Available-6129239 - 613088559067.6
sugar kinaseDN752_RS23900Not Available+6131283 - 613227836375.3
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseDN752_RS23905Not Available+6132300 - 613296824132.1
trap transporter substrate-binding proteinDN752_RS23910Not Available+6132971 - 613397838214.8
trap transporter small permeaseDN752_RS23915Not Available+6133971 - 613446518514.2
trap transporter large permeaseDN752_RS23920Not Available+6134468 - 613576345153.6
hypothetical proteinDN752_RS23925Not Available+6136244 - 613687924948.7
5'/3'-nucleotidase sureDN752_RS23930Not Available+6137069 - 613784828883.1

Displaying genes 4741 – 4750 of 4820 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites