Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | DN752_RS22895 | Not Available | + | 5807133 - 5808791 | 62287.2 |
| glycoside hydrolase family protein | DN752_RS22900 | Not Available | + | 5808934 - 5810049 | 41412.8 |
| alpha-l-fucosidase | DN752_RS22905 | Not Available | + | 5810108 - 5811478 | 51391.2 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS22910 | Not Available | + | 5812824 - 5816267 | 127443.0 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS22915 | Not Available | + | 5816277 - 5818187 | 72044.1 |
| duf5000 domain-containing lipoprotein | DN752_RS22920 | Not Available | + | 5818210 - 5819421 | 45657.1 |
| duf4998 domain-containing protein | DN752_RS22925 | Not Available | + | 5819436 - 5820137 | 26031.7 |
| laci family dna-binding transcriptional regulator | DN752_RS22930 | Not Available | + | 5820506 - 5821528 | 38636.4 |
| rok family protein | DN752_RS22935 | Not Available | + | 5822224 - 5823177 | 34434.5 |
| glycoside hydrolase family 97 protein | DN752_RS22940 | Not Available | + | 5823297 - 5825267 | 74824.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.