Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DN752_RS22590 | Not Available | + | 5705371 - 5708496 | 116102.0 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS22595 | Not Available | + | 5708524 - 5710374 | 69310.3 |
| duf5018-related domain-containing protein | DN752_RS22600 | Not Available | + | 5710412 - 5710879 | 16977.9 |
| rna polymerase sigma factor | DN752_RS22605 | Not Available | - | 5711133 - 5711672 | 21138.4 |
| fecr family protein | DN752_RS22610 | Not Available | + | 5711890 - 5713017 | 42408.9 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS22615 | Not Available | + | 5713219 - 5716539 | 119724.0 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS22620 | Not Available | + | 5716559 - 5718121 | 57501.4 |
| sgnh/gdsl hydrolase family protein | DN752_RS22625 | Not Available | + | 5718378 - 5719040 | 24828.5 |
| hypothetical protein | DN752_RS22630 | Not Available | + | 5719257 - 5720864 | 60130.4 |
| family 43 glycosylhydrolase | DN752_RS22635 | Not Available | + | 5720900 - 5721883 | 36894.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.