Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN752_RS22335 | Not Available | - | 5618220 - 5618489 | 10750.1 |
| hypothetical protein | DN752_RS22340 | Not Available | + | 5618865 - 5619185 | 11705.6 |
| hypothetical protein | DN752_RS22345 | Not Available | + | 5619197 - 5619478 | 10719.9 |
| mannonate dehydratase | DN752_RS22350 | Not Available | - | 5619634 - 5620815 | 44169.8 |
| sdr family oxidoreductase | DN752_RS22355 | Not Available | - | 5620893 - 5621708 | 28768.6 |
| glucuronate isomerase | DN752_RS22360 | Not Available | - | 5621731 - 5623158 | 54656.8 |
| laci family dna-binding transcriptional regulator | DN752_RS22365 | Not Available | + | 5623497 - 5624543 | 39392.6 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS22370 | Not Available | - | 5624809 - 5626485 | 63319.8 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS22375 | Not Available | - | 5626513 - 5629530 | 110692.0 |
| hydroxypyruvate isomerase family protein | DN752_RS22380 | Not Available | - | 5630119 - 5631051 | 34813.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.