Echinicola strongylocentroti strain MEBiC08714

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Echinicola

Description

Echinicola strongylocentroti strain MEBiC08714 is a Gram-negative, rod-shaped bacterium that exhibits heterotrophic metabolism and requires aerobic conditions for growth, with an optimal growth temperature of 25.0 °C. This strain is characterized by its capacity to utilize organic compounds as an energy source, which is typical for many members of the Echinicola genus. The Gram-negative cell wall structure of E. strongylocentroti suggests a potential for diverse interactions with its environment, including possible roles in nutrient cycling or symbiotic relationships. Its aerobic nature indicates a preference for oxygen-rich environments, which may limit its habitat to specific ecological niches where oxygen is readily available. The optimal growth temperature of 25.0 °C aligns with the typical thermal range for mesophilic organisms, indicating that this strain might thrive in moderate climates or environments that are not subject to extreme temperature fluctuations. Understanding the metabolic capabilities and growth conditions of Echinicola strongylocentroti strain MEBiC08714 could provide insights into its ecological role, particularly in marine or freshwater ecosystems where such heterotrophic bacteria contribute to the decomposition of organic matter. This could have implications for the broader microbial community dynamics and biogeochemical processes within its native habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusEchinicola
SpeciesEchinicola strongylocentroti
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Echinicola strongylocentroti strain MEBiC08714

Accession NumberNZ_CP030041.1

Gene Summary

Adenine Count

1744517 bp

Thymine Count

1747944 bp

Guanine Count

1384406 bp

Cytosine Count

1375277 bp

Genome Length

6252144 bp

Protein-coding Genes

4741 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
polysaccharide biosynthesis/export family proteinDN752_RS21585Not Available-5436987 - 543781130818.0
deoxycytidylate deaminaseDN752_RS21590Not Available+5438083 - 543856517788.3
udp-n-acetylmuramate dehydrogenaseDN752_RS21595Not Available-5438639 - 543965537902.7
succinylglutamate desuccinylase/aspartoacylase family proteinDN752_RS21600Not Available+5439805 - 544074334635.1
ergothioneine biosynthesis protein egtbDN752_RS21605Not Available+5440797 - 544194845384.9
l-histidine n(alpha)-methyltransferaseDN752_RS21610Not Available+5441960 - 544292537208.3
trna pseudouridine synthase aDN752_RS21615Not Available+5442876 - 544376633522.4
phospho-sugar mutaseDN752_RS21620Not Available-5443828 - 544555564187.7
hypothetical proteinDN752_RS21625Not Available+5446287 - 544670916208.0
polysaccharide lyase family 8 super-sandwich domain-containing proteinDN752_RS21630Not Available-5446757 - 544877276045.7

Displaying genes 4291 – 4300 of 4820 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites