Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane beta-barrel protein | DN752_RS20680 | Not Available | - | 5258686 - 5259345 | 24501.7 |
| arac family transcriptional regulator | DN752_RS20685 | Not Available | - | 5259482 - 5260312 | 32532.6 |
| sdr family nad(p)-dependent oxidoreductase | DN752_RS20690 | Not Available | + | 5260441 - 5261235 | 28807.3 |
| short chain dehydrogenase | DN752_RS20695 | Not Available | + | 5261249 - 5261806 | 19446.3 |
| aldo/keto reductase | DN752_RS20700 | Not Available | + | 5261855 - 5262805 | 34885.1 |
| carbon-nitrogen hydrolase family protein | DN752_RS20705 | Not Available | - | 5263122 - 5263817 | 25299.6 |
| hypothetical protein | DN752_RS20715 | Not Available | + | 5264439 - 5264972 | 19565.3 |
| hypothetical protein | DN752_RS20720 | Not Available | - | 5265130 - 5266785 | 63930.0 |
| helix-turn-helix transcriptional regulator | DN752_RS20725 | Not Available | + | 5266903 - 5267844 | 36204.7 |
| duf4377 domain-containing protein | DN752_RS20730 | Not Available | - | 5267856 - 5268434 | 22009.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.