Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3'-5' exonuclease | DN752_RS20430 | Not Available | + | 5191968 - 5192579 | 23171.6 |
| impact family protein | DN752_RS20435 | Not Available | - | 5192563 - 5193159 | 22717.1 |
| sugar 3,4-ketoisomerase | DN752_RS20440 | Not Available | + | 5193393 - 5193806 | 15747.6 |
| gnat family n-acetyltransferase | DN752_RS20445 | Not Available | + | 5193784 - 5194698 | 34859.4 |
| glycosyltransferase | DN752_RS20450 | Not Available | + | 5194707 - 5195660 | 35726.2 |
| hypothetical protein | DN752_RS24600 | Not Available | + | 5196470 - 5196712 | 8986.89 |
| m16 family metallopeptidase | DN752_RS20455 | Not Available | - | 5196821 - 5198095 | 49074.9 |
| type ix secretion system outer membrane channel protein porv | DN752_RS20460 | Not Available | - | 5198095 - 5199306 | 44452.5 |
| type ix secretion system sortase poru | DN752_RS20465 | Not Available | - | 5199303 - 5202572 | 120969.0 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | DN752_RS20470 | Not Available | - | 5202569 - 5203261 | 25233.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.