Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS20380 | Not Available | - | 5173860 - 5175602 | 65266.9 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS20385 | Not Available | - | 5175615 - 5178764 | 115267.0 |
| sugar porter family mfs transporter | DN752_RS20390 | Not Available | - | 5178905 - 5180242 | 49015.2 |
| substrate-binding domain-containing protein | DN752_RS20395 | Not Available | - | 5180518 - 5183259 | 103295.0 |
| duf4494 domain-containing protein | DN752_RS20400 | Not Available | - | 5183389 - 5184072 | 26452.2 |
| patatin-like phospholipase family protein | DN752_RS20405 | Not Available | + | 5184245 - 5186539 | 87703.1 |
| cation:proton antiporter | DN752_RS20410 | Not Available | - | 5186551 - 5188569 | 74397.6 |
| duf962 domain-containing protein | DN752_RS20415 | Not Available | - | 5188651 - 5189145 | 18838.6 |
| nad(p)/fad-dependent oxidoreductase | DN752_RS20420 | Not Available | + | 5189228 - 5190343 | 41649.9 |
| na+/h+ antiporter nhac | DN752_RS20425 | Not Available | + | 5190490 - 5191971 | 52651.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.