Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hopj type iii effector protein | DN752_RS20280 | Not Available | - | 5149341 - 5149676 | 12583.6 |
| hypothetical protein | DN752_RS20285 | Not Available | + | 5150268 - 5150858 | 22721.0 |
| alpha/beta fold hydrolase | DN752_RS20290 | Not Available | - | 5150916 - 5151746 | 30728.5 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | DN752_RS20295 | Not Available | - | 5151850 - 5153145 | 47442.2 |
| acp s-malonyltransferase | DN752_RS20300 | Not Available | - | 5153324 - 5154199 | 31163.5 |
| thiol-disulfide oxidoreductase dcc family protein | DN752_RS20305 | Not Available | - | 5154417 - 5154851 | 17077.6 |
| gliding motility-associated c-terminal domain-containing protein | DN752_RS20310 | Not Available | - | 5154848 - 5157634 | 104195.0 |
| succinate dehydrogenase cytochrome b subunit | DN752_RS20315 | Not Available | + | 5158004 - 5158690 | 25219.2 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | DN752_RS20320 | Not Available | + | 5158703 - 5160637 | 71725.1 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | DN752_RS20325 | Not Available | + | 5160669 - 5161418 | 27031.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.