Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | DN752_RS20230 | Not Available | - | 5134184 - 5135110 | 34553.2 |
| phosphoglycerate dehydrogenase | DN752_RS20235 | Not Available | - | 5135886 - 5137778 | 70353.7 |
| duf4920 domain-containing protein | DN752_RS20240 | Not Available | + | 5137931 - 5138431 | 18459.5 |
| hypothetical protein | DN752_RS20245 | Not Available | + | 5138437 - 5138640 | 8045.55 |
| efflux rnd transporter periplasmic adaptor subunit | DN752_RS20250 | Not Available | + | 5139361 - 5140461 | 41571.8 |
| efflux rnd transporter permease subunit | DN752_RS20255 | Not Available | + | 5140498 - 5143641 | 114131.0 |
| tolc family protein | DN752_RS20260 | Not Available | + | 5143641 - 5145134 | 55709.6 |
| signal peptide peptidase sppa | DN752_RS20265 | Not Available | - | 5145423 - 5147180 | 64819.8 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DN752_RS20270 | Not Available | + | 5147265 - 5147744 | 17779.5 |
| mate family efflux transporter | DN752_RS20275 | Not Available | + | 5147927 - 5149318 | 50029.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.