Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DN752_RS20135 | Not Available | + | 5096134 - 5099478 | 122989.0 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS20140 | Not Available | + | 5099491 - 5100903 | 51846.4 |
| serine hydrolase domain-containing protein | DN752_RS20145 | Not Available | + | 5101037 - 5102347 | 49702.3 |
| glutamate racemase | DN752_RS20150 | Not Available | + | 5102359 - 5103888 | 56747.5 |
| n-acyl-d-amino-acid deacylase family protein | DN752_RS20155 | Not Available | + | 5103878 - 5105440 | 57366.8 |
| glycoside hydrolase family 43 protein | DN752_RS20160 | Not Available | + | 5106230 - 5107390 | 43958.3 |
| hybrid sensor histidine kinase/response regulator transcription factor | DN752_RS20165 | Not Available | - | 5107976 - 5112031 | 153913.0 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS20170 | Not Available | + | 5113235 - 5116390 | 119507.0 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS20175 | Not Available | + | 5116404 - 5117657 | 46910.7 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS25270 | Not Available | + | 5117684 - 5118268 | 22596.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.