Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| capsule assembly wzi family protein | DN752_RS19975 | Not Available | + | 5055869 - 5057593 | 65974.8 |
| nucleotidyltransferase family protein | DN752_RS19980 | Not Available | + | 5057911 - 5058837 | 34543.2 |
| alkaline phosphatase | DN752_RS19985 | Not Available | - | 5059142 - 5060053 | 33129.6 |
| helix-turn-helix domain-containing protein | DN752_RS19990 | Not Available | - | 5060099 - 5060677 | 22051.6 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DN752_RS19995 | Not Available | - | 5061144 - 5062631 | 56185.3 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS20000 | Not Available | - | 5062652 - 5065792 | 117456.0 |
| amino acid carrier protein | DN752_RS20005 | Not Available | - | 5066192 - 5068282 | 75276.3 |
| glycosyltransferase family 4 protein | DN752_RS20010 | Not Available | + | 5069232 - 5070395 | 44636.7 |
| wecb/taga/cpsf family glycosyltransferase | DN752_RS20015 | Not Available | - | 5070731 - 5071513 | 29014.5 |
| glycosyltransferase | DN752_RS20020 | Not Available | - | 5071500 - 5072585 | 41280.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.