Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1254 domain-containing protein | DN752_RS19875 | Not Available | + | 5031747 - 5032829 | 40617.8 |
| duf1254 domain-containing protein | DN752_RS19880 | Not Available | + | 5032876 - 5034048 | 43510.7 |
| arsr family transcriptional regulator | DN752_RS19885 | Not Available | + | 5034339 - 5034851 | 19274.0 |
| slbb domain-containing protein | DN752_RS19890 | Not Available | + | 5035170 - 5037761 | 95592.3 |
| wzz/fepe/etk n-terminal domain-containing protein | DN752_RS19895 | Not Available | + | 5037836 - 5038954 | 41903.3 |
| udp-n-acetylglucosamine 4,6-dehydratase (inverting) | DN752_RS19900 | Not Available | + | 5039000 - 5040025 | 38278.1 |
| udp-4-amino-4, 6-dideoxy-n-acetyl-beta-l-altrosamine transaminase | DN752_RS19905 | Not Available | + | 5040058 - 5041242 | 44536.0 |
| pseudaminic acid cytidylyltransferase | DN752_RS19910 | Not Available | + | 5041214 - 5041930 | 27089.4 |
| gnat family n-acetyltransferase | DN752_RS24595 | Not Available | + | 5041905 - 5042915 | 39449.3 |
| pseudaminic acid synthase | DN752_RS19920 | Not Available | + | 5042912 - 5043955 | 38537.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.