Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| porin family protein | DN752_RS19290 | Not Available | - | 4894110 - 4894847 | 27583.4 |
| ompa family protein | DN752_RS19295 | Not Available | - | 4894882 - 4895529 | 23215.5 |
| tetratricopeptide repeat protein | DN752_RS19300 | Not Available | - | 4895555 - 4896307 | 28056.9 |
| duf6515 family protein | DN752_RS19305 | Not Available | - | 4896450 - 4897436 | 36920.6 |
| duf2092 domain-containing protein | DN752_RS19310 | Not Available | - | 4897448 - 4898176 | 27522.7 |
| helix-turn-helix domain-containing protein | DN752_RS19315 | Not Available | - | 4898395 - 4899495 | 42527.4 |
| helix-turn-helix domain-containing protein | DN752_RS19320 | Not Available | - | 4899876 - 4901072 | 46113.2 |
| gliding motility-associated c-terminal domain-containing protein | DN752_RS19325 | Not Available | + | 4901902 - 4920552 | 656310.0 |
| type ix secretion system membrane protein porp/sprf | DN752_RS19330 | Not Available | + | 4920556 - 4921530 | 36492.7 |
| duf5675 family protein | DN752_RS19335 | Not Available | + | 4921876 - 4922676 | 30162.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.