Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| prc-barrel domain-containing protein | DN752_RS18760 | Not Available | - | 4780783 - 4781157 | 13826.2 |
| helix-turn-helix domain-containing protein | DN752_RS18765 | Not Available | + | 4781412 - 4781969 | 20941.6 |
| sdr family oxidoreductase | DN752_RS18770 | Not Available | + | 4782078 - 4782935 | 30784.4 |
| hypothetical protein | DN752_RS18775 | Not Available | + | 4782995 - 4783222 | 8685.94 |
| four-helix bundle copper-binding protein | DN752_RS18780 | Not Available | - | 4783710 - 4784066 | 12812.2 |
| sigma-54-dependent transcriptional regulator | DN752_RS18785 | Not Available | + | 4784605 - 4786008 | 52570.3 |
| hypothetical protein | DN752_RS18790 | Not Available | - | 4785992 - 4786591 | 22371.2 |
| hypothetical protein | DN752_RS18795 | Not Available | - | 4786619 - 4787146 | 20439.9 |
| response regulator | DN752_RS18800 | Not Available | + | 4787764 - 4788210 | 16919.4 |
| atp-binding protein | DN752_RS18805 | Not Available | + | 4788225 - 4790402 | 82568.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.