Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | DN752_RS18345 | Not Available | - | 4675654 - 4677114 | 55150.1 |
| efflux rnd transporter permease subunit | DN752_RS18350 | Not Available | - | 4677111 - 4680293 | 117594.0 |
| efflux rnd transporter periplasmic adaptor subunit | DN752_RS18355 | Not Available | - | 4680448 - 4681593 | 42585.2 |
| arginine decarboxylase | DN752_RS18365 | Not Available | + | 4682000 - 4683388 | 53897.0 |
| alanine racemase | DN752_RS18370 | Not Available | - | 4683527 - 4684642 | 40973.2 |
| alpha/beta hydrolase | DN752_RS18375 | Not Available | - | 4684647 - 4685687 | 39054.7 |
| hypothetical protein | DN752_RS18380 | Not Available | + | 4686192 - 4686764 | 21760.7 |
| hypothetical protein | DN752_RS18385 | Not Available | + | 4686815 - 4687306 | 17991.2 |
| hypothetical protein | DN752_RS18390 | Not Available | + | 4687409 - 4687855 | 17725.2 |
| pyrroline-5-carboxylate reductase | DN752_RS18395 | Not Available | - | 4687955 - 4688752 | 28178.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.