Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 3 n-terminal domain-containing protein | DN752_RS18040 | Not Available | + | 4597472 - 4599865 | 86450.8 |
| gh92 family glycosyl hydrolase | DN752_RS18045 | Not Available | + | 4600103 - 4602343 | 83090.1 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS18050 | Not Available | + | 4602781 - 4605903 | 113997.0 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS18055 | Not Available | + | 4605923 - 4607539 | 60246.5 |
| pin domain-containing protein | DN752_RS18060 | Not Available | - | 4607694 - 4608092 | 15178.5 |
| duf2191 domain-containing protein | DN752_RS18065 | Not Available | - | 4608089 - 4608295 | 7757.42 |
| ribonuclease hii | DN752_RS18070 | Not Available | - | 4608421 - 4609026 | 22073.7 |
| mgh1-like glycoside hydrolase domain-containing protein | DN752_RS18075 | Not Available | - | 4608998 - 4611670 | 104333.0 |
| glycosyltransferase family protein | DN752_RS18080 | Not Available | - | 4611985 - 4613118 | 42907.8 |
| udp-2,3-diacylglucosamine diphosphatase | DN752_RS18085 | Not Available | - | 4613121 - 4613975 | 33197.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.