Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf294 nucleotidyltransferase-like domain-containing protein | DN752_RS16765 | Not Available | - | 4329500 - 4331389 | 72681.1 |
| had family hydrolase | DN752_RS16770 | Not Available | + | 4331521 - 4332183 | 24956.4 |
| sgnh/gdsl hydrolase family protein | DN752_RS16775 | Not Available | - | 4332269 - 4333018 | 27648.5 |
| s66 peptidase family protein | DN752_RS16780 | Not Available | - | 4333082 - 4334131 | 38356.4 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | DN752_RS16785 | Not Available | - | 4334154 - 4335413 | 48345.5 |
| duf423 domain-containing protein | DN752_RS16790 | Not Available | - | 4335504 - 4335890 | 13424.8 |
| yggs family pyridoxal phosphate-dependent enzyme | DN752_RS16795 | Not Available | - | 4336077 - 4336751 | 25523.0 |
| gh3 auxin-responsive promoter family protein | DN752_RS16800 | Not Available | + | 4336948 - 4338486 | 58706.9 |
| lyse family translocator | DN752_RS16805 | Not Available | + | 4338491 - 4339120 | 22769.9 |
| type ii toxin-antitoxin system vapb family antitoxin | DN752_RS16810 | Not Available | + | 4339212 - 4339400 | 7165.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.