Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS16510 | Not Available | + | 4269581 - 4271203 | 60836.0 |
| polysaccharide lyase family 8 super-sandwich domain-containing protein | DN752_RS16515 | Not Available | + | 4271274 - 4274750 | 126084.0 |
| heparinase ii/iii family protein | DN752_RS16520 | Not Available | + | 4274820 - 4276772 | 74314.5 |
| sulfatase-like hydrolase/transferase | DN752_RS16525 | Not Available | - | 4276833 - 4278167 | 50038.7 |
| rna polymerase sigma factor | DN752_RS16530 | Not Available | + | 4278571 - 4279164 | 22819.7 |
| hypothetical protein | DN752_RS24525 | Not Available | + | 4279853 - 4280155 | 11574.0 |
| fecr family protein | DN752_RS16540 | Not Available | + | 4280370 - 4281368 | 36729.6 |
| tonb-dependent receptor | DN752_RS16545 | Not Available | + | 4281469 - 4284954 | 128774.0 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS16550 | Not Available | + | 4284971 - 4286731 | 66883.0 |
| sulfatase family protein | DN752_RS16555 | Not Available | + | 4286847 - 4288391 | 56464.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.