Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lytr/algr family response regulator transcription factor | DN752_RS16460 | Not Available | - | 4254127 - 4254867 | 27848.5 |
| pas domain-containing sensor histidine kinase | DN752_RS16465 | Not Available | + | 4255586 - 4257202 | 61486.4 |
| duf1080 domain-containing protein | DN752_RS16470 | Not Available | + | 4257447 - 4258328 | 32783.5 |
| hypothetical protein | DN752_RS16475 | Not Available | - | 4258389 - 4258652 | 10153.8 |
| duf2264 domain-containing protein | DN752_RS16480 | Not Available | - | 4258851 - 4260107 | 46507.6 |
| beta-n-acetylhexosaminidase | DN752_RS16485 | Not Available | - | 4260179 - 4261762 | 60382.4 |
| glycoside hydrolase family 88 protein | DN752_RS16490 | Not Available | - | 4261887 - 4263116 | 46659.3 |
| rna polymerase sigma factor | DN752_RS16495 | Not Available | + | 4263464 - 4264066 | 23341.4 |
| fecr family protein | DN752_RS16500 | Not Available | + | 4264999 - 4266042 | 39212.8 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS16505 | Not Available | + | 4266101 - 4269550 | 127944.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.