Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pqq-binding-like beta-propeller repeat protein | DN752_RS16415 | Not Available | + | 4228916 - 4230499 | 59442.3 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | DN752_RS16420 | Not Available | + | 4230707 - 4233817 | 119119.0 |
| duf3472 domain-containing protein | DN752_RS16425 | Not Available | + | 4233852 - 4235153 | 49046.1 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS16430 | Not Available | + | 4235558 - 4238569 | 109649.0 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS24985 | Not Available | + | 4238589 - 4239554 | 36224.2 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS24990 | Not Available | + | 4239554 - 4240222 | 25174.5 |
| gliding motility-associated c-terminal domain-containing protein | DN752_RS16440 | Not Available | + | 4240722 - 4248737 | 279559.0 |
| type ix secretion system membrane protein porp/sprf | DN752_RS16445 | Not Available | + | 4248745 - 4249713 | 35475.2 |
| ompa family protein | DN752_RS25260 | Not Available | + | 4249723 - 4251702 | 75620.0 |
| t9ss type a sorting domain-containing protein | DN752_RS16455 | Not Available | + | 4251744 - 4254104 | 85116.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.