Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | DN752_RS16365 | Not Available | + | 4210192 - 4210767 | 22370.1 |
| fecr family protein | DN752_RS16370 | Not Available | + | 4211510 - 4212580 | 39984.5 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS16375 | Not Available | + | 4212705 - 4216103 | 126517.0 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS16380 | Not Available | + | 4216117 - 4217943 | 69753.8 |
| duf5126 domain-containing protein | DN752_RS16385 | Not Available | + | 4217955 - 4219007 | 39207.3 |
| duf3472 domain-containing protein | DN752_RS16390 | Not Available | + | 4219244 - 4221070 | 67658.1 |
| discoidin domain-containing protein | DN752_RS16395 | Not Available | + | 4221113 - 4222735 | 60557.1 |
| acyltransferase family protein | DN752_RS16400 | Not Available | + | 4222865 - 4223959 | 41316.3 |
| peptide-n-glycosidase f-related protein | DN752_RS16405 | Not Available | - | 4224608 - 4226527 | 71962.8 |
| sulfatase | DN752_RS16410 | Not Available | - | 4226607 - 4228034 | 53841.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.