Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane beta-barrel protein | DN752_RS16315 | Not Available | - | 4198874 - 4199836 | 37850.9 |
| mechanosensitive ion channel family protein | DN752_RS16320 | Not Available | - | 4199926 - 4200828 | 33848.4 |
| carbon-nitrogen hydrolase family protein | DN752_RS16325 | Not Available | + | 4200982 - 4202523 | 58971.2 |
| kdsc family phosphatase | DN752_RS16330 | Not Available | + | 4202775 - 4203326 | 20506.2 |
| 3-deoxy-8-phosphooctulonate synthase | DN752_RS16335 | Not Available | + | 4203330 - 4204178 | 30594.8 |
| l,d-transpeptidase family protein | DN752_RS16340 | Not Available | + | 4204311 - 4205966 | 63160.7 |
| l,d-transpeptidase family protein | DN752_RS16345 | Not Available | + | 4206060 - 4207667 | 61102.0 |
| murein l,d-transpeptidase catalytic domain family protein | DN752_RS16350 | Not Available | - | 4207703 - 4208428 | 26498.3 |
| tonb-dependent receptor | DN752_RS16355 | Not Available | + | 4208835 - 4209244 | 15242.6 |
| gtp cyclohydrolase i fole | DN752_RS16360 | Not Available | + | 4209204 - 4209902 | 26569.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.