Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor domain-containing protein | DN752_RS09025 | Not Available | + | 2346233 - 2348992 | 102442.0 |
| duf4876 domain-containing protein | DN752_RS09030 | Not Available | + | 2349005 - 2350318 | 48166.4 |
| duf6850 family outer membrane beta-barrel protein | DN752_RS09035 | Not Available | + | 2350340 - 2351875 | 59077.6 |
| cytochrome-c peroxidase | DN752_RS09040 | Not Available | + | 2351940 - 2353076 | 43303.5 |
| tolc family protein | DN752_RS09045 | Not Available | - | 2353332 - 2354765 | 52811.4 |
| efflux rnd transporter permease subunit | DN752_RS09050 | Not Available | - | 2354758 - 2357922 | 116548.0 |
| efflux rnd transporter periplasmic adaptor subunit | DN752_RS09055 | Not Available | - | 2357949 - 2359040 | 40942.0 |
| kelch repeat-containing protein | DN752_RS09070 | Not Available | + | 2360310 - 2362832 | 96198.6 |
| hypothetical protein | DN752_RS09075 | Not Available | - | 2362852 - 2365053 | 84035.3 |
| duf3823 domain-containing protein | DN752_RS09080 | Not Available | - | 2365146 - 2365958 | 30432.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.