Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nudix domain-containing protein | DN752_RS08870 | Not Available | - | 2303424 - 2303873 | 17347.3 |
| hypothetical protein | DN752_RS08875 | Not Available | + | 2304688 - 2306466 | 68111.1 |
| hypothetical protein | DN752_RS08880 | Not Available | + | 2306469 - 2306879 | 15602.1 |
| aldose epimerase family protein | DN752_RS08885 | Not Available | - | 2307391 - 2308551 | 41935.7 |
| l-ribulose-5-phosphate 4-epimerase | DN752_RS08890 | Not Available | - | 2308640 - 2309344 | 26231.4 |
| two-component regulator propeller domain-containing protein | DN752_RS08895 | Not Available | + | 2309764 - 2312925 | 120835.0 |
| response regulator transcription factor | DN752_RS08900 | Not Available | + | 2312930 - 2313520 | 21984.4 |
| zinc-binding alcohol dehydrogenase family protein | DN752_RS08905 | Not Available | - | 2313927 - 2314940 | 35961.2 |
| l-fucose:h+ symporter permease | DN752_RS08910 | Not Available | - | 2315210 - 2316505 | 46632.1 |
| aldo/keto reductase | DN752_RS08915 | Not Available | - | 2316671 - 2317705 | 38190.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.