Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 88 protein | DN752_RS08770 | Not Available | - | 2269802 - 2271016 | 45818.9 |
| bnr repeat-containing protein | DN752_RS08775 | Not Available | - | 2271263 - 2272576 | 49181.3 |
| duf2264 domain-containing protein | DN752_RS08780 | Not Available | - | 2273196 - 2274470 | 48029.7 |
| family 16 glycosylhydrolase | DN752_RS08785 | Not Available | - | 2274645 - 2275526 | 34040.8 |
| duf1080 domain-containing protein | DN752_RS08790 | Not Available | - | 2275837 - 2276646 | 30667.8 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS08795 | Not Available | - | 2276933 - 2278618 | 62748.7 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS08800 | Not Available | - | 2278633 - 2281602 | 109489.0 |
| helix-turn-helix domain-containing protein | DN752_RS08805 | Not Available | + | 2281856 - 2283007 | 44207.9 |
| glycoside hydrolase family 43 protein | DN752_RS08810 | Not Available | + | 2283350 - 2284285 | 35796.2 |
| psd1 and planctomycete cytochrome c domain-containing protein | DN752_RS08815 | Not Available | + | 2285658 - 2287952 | 86347.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.