Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Echinicola strongylocentroti strain MEBiC08714
Accession NumberNZ_CP030041.1
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyl transferase abieii/abigii toxin family protein | DN752_RS08620 | Not Available | - | 2226906 - 2227877 | 37000.3 |
| duf6577 family protein | DN752_RS08625 | Not Available | - | 2227958 - 2228728 | 30303.3 |
| rhum family protein | DN752_RS08630 | Not Available | - | 2228943 - 2229905 | 36443.3 |
| hypothetical protein | DN752_RS08635 | Not Available | - | 2230000 - 2230884 | 34319.6 |
| site-specific integrase | DN752_RS08640 | Not Available | - | 2230899 - 2232212 | 51414.5 |
| alkaline phosphatase d family protein | DN752_RS08645 | Not Available | - | 2233351 - 2235981 | 97467.1 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS08650 | Not Available | - | 2235996 - 2237666 | 62685.3 |
| tonb-dependent receptor | DN752_RS08655 | Not Available | - | 2237671 - 2240991 | 122608.0 |
| fecr family protein | DN752_RS08660 | Not Available | - | 2241125 - 2242294 | 44535.1 |
| rna polymerase sigma factor | DN752_RS08665 | Not Available | - | 2242446 - 2242997 | 21699.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.